STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamp3Lysosomal associated membrane protein 3. (251 aa)    
Predicted Functional Partners:
lamp2
Lysosomal associated membrane protein 2.
     
0.844
ENSSORP00005027453
annotation not available
   
 
0.843
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.705
rptor
Regulatory associated protein of MTOR complex 1.
    
 
 0.702
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 
 0.702
ENSSORP00005056991
NPR3-like, GATOR1 complex subunit.
    
 
 0.693
wdr24
WD repeat domain 24.
    
 
 0.691
seh1l
SEH1 like nucleoporin.
    
   0.679
ENSSORP00005010110
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
   0.679
SZT2
SZT2 subunit of KICSTOR complex.
    
   0.679
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.