STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcts1MCTS1 re-initiation and release factor. (181 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.995
denr
Density regulated re-initiation and release factor.
   
 
 0.990
rps3a
Ribosomal protein S3A.
    
  0.986
rps11
Ribosomal protein S11.
   
  0.986
rps28
Ribosomal protein S28.
    
  0.986
rps3
Ribosomal protein S3.
    
  0.985
rps9
Ribosomal protein S9.
   
 0.985
LOC115423452
40S ribosomal protein SA.
   
  0.982
ENSSORP00005007308
Ribosomal protein S18.
    
  0.978
rps5
Ribosomal protein S5.
   
  0.978
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.