STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115415503Sex comb on midleg-like protein 4. (270 aa)    
Predicted Functional Partners:
LOC115425465
Lysine-specific demethylase 2B-like.
    
 0.754
LOC115424030
Lysine-specific demethylase 2B-like.
    
 0.754
ENSSORP00005023183
Lysine (K)-specific demethylase 2Ab.
    
 0.754
LOC115430864
Lysine-specific demethylase 2B-like.
    
 0.754
LOC115418584
Lysine-specific demethylase 2A-like.
    
 0.754
ENSSORP00005036459
annotation not available
    
  0.742
ENSSORP00005037507
Lysine (K)-specific demethylase 6B, b.
    
 0.718
ENSSORP00005045087
Lysine (K)-specific demethylase 6A, like.
    
 0.718
ENSSORP00005051401
Lysine (K)-specific demethylase 6A.
    
 0.718
ENSSORP00005052721
Lysine (K)-specific demethylase 6B, a.
    
 0.718
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.