STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ss18SS18 subunit of BAF chromatin remodeling complex. (420 aa)    
Predicted Functional Partners:
ENSSORP00005055006
BAF chromatin remodeling complex subunit BCL7A.
    
 0.955
brd9
Bromodomain containing 9.
   
 0.950
phf10
PHD finger protein 10.
    
 0.948
smarcd2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
    
 0.947
LOC115424627
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like.
   
 0.945
bcl7b
BAF chromatin remodeling complex subunit BCL7B.
    
 0.945
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.945
ENSSORP00005019154
AT rich interactive domain 2 (ARID, RFX-like).
    
 0.938
actl6a
Actin like 6A.
    
 0.922
smarcc1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 0.902
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.