STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115435886Terminal nucleotidyltransferase 4A-like. (816 aa)    
Predicted Functional Partners:
LOC115426865
Zinc finger CCHC domain-containing protein 7-like.
   
 0.940
ENSSORP00005049608
annotation not available
   
 0.940
ENSSORP00005050063
Mtr4 exosome RNA helicase.
   
 0.936
ENSSORP00005050078
annotation not available
   
 0.936
tent4b
Terminal nucleotidyltransferase 4B.
  
  
 
0.925
ENSSORP00005020151
Terminal nucleotidyltransferase 4A.
  
  
 
0.924
LOC115419262
NFX1-type zinc finger-containing protein 1-like.
    
 0.872
exosc10
Exosome component 10.
   
 
 0.832
ENSSORP00005025824
Zinc finger, CCHC domain containing 14.
   
 0.823
zcchc8
Zinc finger CCHC-type containing 8.
     
 0.804
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.