STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005057213Makorin, ring finger protein, 4. (336 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
     
 0.793
cpsf2
Cleavage and polyadenylation specific factor 2.
   
 
  0.792
rps27a
Ribosomal protein S27a.
    
  0.698
LOC115438809
Ubiquilin-4-like.
    
  0.657
ubb
Ubiquitin B.
   
  0.572
ENSSORP00005038754
Ubiquitin B.
   
  0.572
ENSSORP00005058574
annotation not available
   
  0.572
atg7
Autophagy related 7.
    
  0.570
ENSSORP00005024595
annotation not available
     
 0.570
uba5
Ubiquitin like modifier activating enzyme 5.
    
  0.570
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.