STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115419289Rho guanine nucleotide exchange factor 25-like. (665 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
   
 
  0.842
ENSSORP00005017029
Relaxin family peptide receptor 1.
   
 
  0.815
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
   
 
  0.815
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 
  0.815
ENSSORP00005038431
Relaxin family peptide receptor 2a.
   
 
  0.815
LOC115418524
Guanine nucleotide-binding protein subunit alpha-11-like.
    
 0.762
LOC115413636
Guanine nucleotide-binding protein G(q) subunit alpha-like.
    
 0.758
ENSSORP00005022479
annotation not available
    
 0.758
ENSSORP00005022483
annotation not available
    
 0.758
LOC115426094
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.758
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.