ENSSORP00005058255 protein (Sphaeramia orbicularis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSORP00005058255

annotation not available (218 aa)

Predicted Functional Partners:

ENSSORP00005033385

0.868

ctnnb1

0.815

ENSSORP00005021929

0.771

LOC115419697

0.771

CDH20

0.736

ENSSORP00005016263

0.728

cdh17

0.726

ENSSORP00005000870

0.723

ENSSORP00005000887

0.723

ENSSORP00005041293

0.723

Your Current Organism:

Sphaeramia orbicularis

NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH20	ENSSORP00005000870	ENSSORP00005058072	ENSSORP00005000870	Cadherin 20.	annotation not available	0.808
CDH20	ENSSORP00005000887	ENSSORP00005058072	ENSSORP00005000887	Cadherin 20.	Catenin (cadherin-associated protein), alpha 2.	0.808
CDH20	ENSSORP00005021929	ENSSORP00005058072	ENSSORP00005021929	Cadherin 20.	annotation not available	0.849
CDH20	ENSSORP00005033385	ENSSORP00005058072	ENSSORP00005033385	Cadherin 20.	annotation not available	0.771
CDH20	ENSSORP00005041293	ENSSORP00005058072	ENSSORP00005041293	Cadherin 20.	Catenin (cadherin-associated protein), alpha 1.	0.808
CDH20	ENSSORP00005058255	ENSSORP00005058072	ENSSORP00005058255	Cadherin 20.	annotation not available	0.736
CDH20	LOC115419697	ENSSORP00005058072	ENSSORP00005053621	Cadherin 20.	Junction plakoglobin-like.	0.849
CDH20	cdh17	ENSSORP00005058072	ENSSORP00005036360	Cadherin 20.	Cadherin 17.	0.915
CDH20	ctnnb1	ENSSORP00005058072	ENSSORP00005027331	Cadherin 20.	Catenin beta 1.	0.948
ENSSORP00005000870	CDH20	ENSSORP00005000870	ENSSORP00005058072	annotation not available	Cadherin 20.	0.808
ENSSORP00005000870	ENSSORP00005000887	ENSSORP00005000870	ENSSORP00005000887	annotation not available	Catenin (cadherin-associated protein), alpha 2.	0.899
ENSSORP00005000870	ENSSORP00005016263	ENSSORP00005000870	ENSSORP00005016263	annotation not available	Cadherin 13, H-cadherin (heart).	0.814
ENSSORP00005000870	ENSSORP00005021929	ENSSORP00005000870	ENSSORP00005021929	annotation not available	annotation not available	0.938
ENSSORP00005000870	ENSSORP00005033385	ENSSORP00005000870	ENSSORP00005033385	annotation not available	annotation not available	0.754
ENSSORP00005000870	ENSSORP00005058255	ENSSORP00005000870	ENSSORP00005058255	annotation not available	annotation not available	0.723
ENSSORP00005000870	LOC115419697	ENSSORP00005000870	ENSSORP00005053621	annotation not available	Junction plakoglobin-like.	0.939
ENSSORP00005000870	cdh17	ENSSORP00005000870	ENSSORP00005036360	annotation not available	Cadherin 17.	0.840
ENSSORP00005000870	ctnnb1	ENSSORP00005000870	ENSSORP00005027331	annotation not available	Catenin beta 1.	0.972
ENSSORP00005000887	CDH20	ENSSORP00005000887	ENSSORP00005058072	Catenin (cadherin-associated protein), alpha 2.	Cadherin 20.	0.808
ENSSORP00005000887	ENSSORP00005000870	ENSSORP00005000887	ENSSORP00005000870	Catenin (cadherin-associated protein), alpha 2.	annotation not available	0.899