STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0010Hypothetical protein. (216 aa)    
Predicted Functional Partners:
BF49_0008
Multidrug and toxin extrusion MATE family efflux pump YdhENorM homolog.
       0.780
BF49_0009
Hypothetical protein.
       0.773
BF49_1748
FIG00440295 hypothetical protein.
  
     0.736
BF49_0255
2hydroxychromene2carboxylate isomerase family protein glutathionedependent.
  
     0.672
BF49_5925
14dihydroxy2naphthoylCoA hydrolase EC 31228 in phylloquinone biosynthesis.
 
     0.654
BF49_3228
Transcriptional regulator TetR family.
  
     0.628
BF49_6045
2hydroxychromene2carboxylate isomerase.
  
     0.615
BF49_4154
FIG00440809 hypothetical protein.
 
     0.556
BF49_3994
FIG00445140 hypothetical protein.
  
   
 0.550
BF49_1848
FIG00442018 hypothetical protein.
  
  
  0.510
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.