STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0011FIG00443355 hypothetical protein. (371 aa)    
Predicted Functional Partners:
BF49_6118
Putative ironsulfur cluster assembly scaffold protein for SUF system SufE2.
   
    0.752
BF49_4150
TRAP dicarboxylate transporter DctQ subunit unknown substrate 3.
  
     0.611
BF49_3911
Possible outer membrane protein.
  
     0.569
BF49_1189
Efflux transporter RND family MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.561
BF49_0012
Immuneresponsive protein 1.
       0.553
BF49_0440
FIG00443183 hypothetical protein.
 
     0.536
BF49_3317
FIG00441143 hypothetical protein.
  
     0.535
BF49_2972
FIG00439885 hypothetical protein.
  
     0.528
BF49_0636
Bll0142 protein.
  
     0.517
BF49_4846
Bll6811 hypothetical protein.
   
    0.517
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.