Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
BF49_0026NifUlike domain protein. (189 aa)    
Predicted Functional Partners:
BF49_0721
Cysteine desulfurase EC 2817.
 
 0.894
BF49_6118
Putative ironsulfur cluster assembly scaffold protein for SUF system SufE2.
  
 0.889
BF49_0715
Iron binding protein SufA for ironsulfur cluster assembly; Belongs to the HesB/IscA family.
 
 0.856
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
  
 
 0.819
BF49_1111
Cysteine desulfurase EC 2817.
  
 0.810
BF49_6783
Probable iron binding protein from the HesB IscA SufA family; Belongs to the HesB/IscA family.
 
 0.810
BF49_0337
Succinate dehydrogenase ironsulfur protein EC 13991; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.773
BF49_5283
Succinate dehydrogenase ironsulfur protein EC 13991.
  
 
 0.773
BF49_6781
Probable iron binding protein from the HesB IscA SufA family.
  
 0.773
lipA
Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
 0.764
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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