Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_0030Hydrolase in polyol utilization gene cluster haloacid dehalogenaselike family. (226 aa)    
Predicted Functional Partners:
fur
Ferric uptake regulation protein FUR; Belongs to the Fur family.
       0.797
BF49_0027
TsaB protein required for threonylcarbamoyladenosine t6A formation in tRNA.
       0.683
BF49_0028
RibosomalproteinS18palanine acetyltransferase EC 231.
       0.683
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 0.663
BF49_5564
FIG00440890 hypothetical protein.
  
    0.662
BF49_4884
Trehalose synthase EC 549916.
  
 
 0.629
trmB
tRNA guanine46N7methyltransferase EC 21133; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
    
  0.585
BF49_0032
Phosphate starvationinducible protein PhoH predicted ATPase.
     
 0.527
BF49_0026
NifUlike domain protein.
       0.520
BF49_4837
Dmannonate oxidoreductase EC 11157.
   
 0.515
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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