Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0045COG2740 Predicted nucleicacidbinding protein implicated in transcription termination ribosomal protein L7Ae family protein. (227 aa)    
Predicted Functional Partners:
rimP
FIG000325 clustered with transcription termination protein NusA; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
  
 0.897
nusA
Transcription termination protein NusA; Participates in both transcription termination and antitermination.
  
    0.879
BF49_0046
Translation initiation factor 2.
 
  
 0.839
BF49_0052
FIG000325 clustered with transcription termination protein NusA.
 
  
 0.674
BF49_0048
FIG000325 clustered with transcription termination protein NusA.
 
  
 0.673
BF49_7365
FIG000325 clustered with transcription termination protein NusA.
 
  
 0.673
BF49_0051
Translation initiation factor 2.
 
  
 0.643
rplD
LSU ribosomal protein L4p L1e; Forms part of the polypeptide exit tunnel.
  
    0.641
rpsB
SSU ribosomal protein S2p SAe; Belongs to the universal ribosomal protein uS2 family.
  
    0.629
BF49_6575
GcrA cell cycle regulator.
  
     0.617
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]