Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
katGCatalase EC 11116 Peroxidase EC 11117; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (722 aa)    
Predicted Functional Partners:
BF49_3201
Superoxide dismutase Fe EC 11511; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.932
hisC
Biosynthetic Aromatic amino acid aminotransferase beta EC 26157 Histidinolphosphate aminotransferase EC 2619; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.908
hisC-2
Histidinolphosphate aminotransferase EC 2619; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.908
BF49_2942
Aspartate aminotransferase EC 2611.
     
 0.903
BF49_5786
Bll5848 putative decarboxylase.
    
  0.902
kynU
Kynureninase EC 3713; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
     
  0.900
BF49_6932
Cyclohexadienyl dehydratase EC 42151EC 42191; Belongs to the bacterial solute-binding protein 3 family.
     
 0.807
BF49_4194
Prephenate dehydratase EC 42151.
     
  0.800
gshB
Glutathione synthetase EC 6323; Belongs to the prokaryotic GSH synthase family.
      
 0.753
BF49_0061
Hydrogen peroxideinducible genes activator; Belongs to the LysR transcriptional regulatory family.
     
 0.667
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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