Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_0069Glyoxylate reductase EC 11179 Glyoxylate reductase EC 11126 Hydroxypyruvate reductase EC 11181; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (333 aa)    
Predicted Functional Partners:
BF49_4162
Dglycerate 2kinase EC 271.
 
 0.952
BF49_0473
Serineglyoxylate aminotransferase EC 26145.
  
 
 0.941
BF49_5632
Serineglyoxylate aminotransferase EC 26145.
  
 
 0.941
BF49_2901
MalylCoA lyase EC 41324; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.928
BF49_1513
2hydroxy3oxopropionate reductase EC 11160.
    
 0.922
BF49_4361
D3phosphoglycerate dehydrogenase EC 11195.
 
  
 
0.919
BF49_4940
D3phosphoglycerate dehydrogenase EC 11195.
 
  
 
0.918
glcB
Malate synthase G EC 2339; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.915
BF49_3074
Glycolate dehydrogenase EC 119914 FADbinding subunit GlcE.
   
 0.913
BF49_3075
Glycolate dehydrogenase EC 119914 subunit GlcD.
   
 0.913
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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