STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0085Nucleotidyl transferase possibly involved in threonylcarbamoyladenosine formation. (240 aa)    
Predicted Functional Partners:
BF49_0083
N-acetylmuramate 1-kinase; TsaE protein required for threonylcarbamoyladenosine t6A37 formation in tRNA Phosphotransferase involved in threonylcarbamoyladenosine t6A37 formation in tRNA.
 
 
 0.971
murB
UDPNacetylenolpyruvoylglucosamine reductase EC 111158; Cell wall formation.
    
  0.903
BF49_2513
dTDPglucose 46dehydratase EC 42146; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.883
murA
UDPNacetylglucosamine 1carboxyvinyltransferase EC 2517; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.846
BF49_2511
dTDP4dehydrorhamnose 35epimerase EC 51313; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.838
murC
UDPNacetylmuramatealanine ligase EC 6328; Cell wall formation; Belongs to the MurCDEF family.
    
 0.827
BF49_2432
Mannose1phosphate guanylyltransferase GDP EC 27722 Mannose6phosphate isomerase EC 27722; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.817
BF49_5727
Mannose1phosphate guanylyltransferase GDP EC 27722 Mannose6phosphate isomerase EC 27722; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.817
BF49_2512
Glucose1phosphate thymidylyltransferase EC 27724; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.792
BF49_5300
Glucose1phosphate thymidylyltransferase EC 27724.
  
  
 0.792
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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