STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0114FIG01006394 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (340 aa)    
Predicted Functional Partners:
BF49_5414
Betagalactosidase EC 32123; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.929
BF49_5413
Betagalactosidase EC 32123; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.927
BF49_3464
FIG01006394 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 
0.926
BF49_0115
Exopolysaccharide production protein ExoQ.
 
   
 0.837
BF49_2680
Endo14betaxylanase A precursor EC 3218.
 
  
 0.598
BF49_0540
Polysaccharide deacetylase.
 
   
 0.560
BF49_2504
Hypothetical protein.
    
 
 0.549
BF49_3572
FIG01200701 possible membrane protein.
    
 
 0.549
BF49_4411
FIG00853353 hypothetical protein.
    
 
 0.549
BF49_4812
Chemotaxis protein motC.
    
 
 0.549
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.