STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_01302hydroxymuconic semialdehyde hydrolase EC 311. (278 aa)    
Predicted Functional Partners:
BF49_3676
NADHUBIQUINONE OXIDOREDUCTASE 18 KD SUBUNIT EC 1653 EC 16993.
 
     0.625
BF49_7100
NADHUBIQUINONE OXIDOREDUCTASE 18 KD SUBUNIT EC 1653 EC 16993.
 
     0.625
BF49_6558
Ubiquinolcytochrome C chaperone.
  
     0.624
BF49_7188
Distant similarity with leukotriene C4 synthase microsomal glutathione Stransferase.
  
     0.580
BF49_3498
NADH pyrophosphatase EC 36122.
 
  
  0.578
infC
Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.577
BF49_6269
Chaperone required for the assembly of the mitochondrial F1ATPase.
  
     0.516
BF49_4884
Trehalose synthase EC 549916.
  
    0.508
BF49_4071
FIG00443189 hypothetical protein.
  
  
  0.457
BF49_0129
Hypothetical protein.
     
 0.446
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.