rpmI protein (Bradyrhizobium sp.) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

rpmI

LSU ribosomal protein L35p; Belongs to the bacterial ribosomal protein bL35 family. (66 aa)

Predicted Functional Partners:

rplT

0.984

rpsB

0.971

rpmB

0.969

rpsU

0.969

rpmE

0.968

rpsF

0.966

rpmG

0.966

rpmF

0.966

rpsR

0.965

rpsN

0.965

Your Current Organism:

Bradyrhizobium sp.

NCBI taxonomy Id: 376
Other names: B. sp.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplT	rpmB	BF49_0134	BF49_0617	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	0.957
rplT	rpmE	BF49_0134	BF49_4283	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L31p LSU ribosomal protein L31p zincindependent; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.964
rplT	rpmF	BF49_0134	BF49_7238	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.962
rplT	rpmG	BF49_0134	BF49_6460	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L33p LSU ribosomal protein L33p zincindependent; Belongs to the bacterial ribosomal protein bL33 family.	0.963
rplT	rpmI	BF49_0134	BF49_0133	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	LSU ribosomal protein L35p; Belongs to the bacterial ribosomal protein bL35 family.	0.984
rplT	rpsB	BF49_0134	BF49_6701	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S2p SAe; Belongs to the universal ribosomal protein uS2 family.	0.978
rplT	rpsF	BF49_0134	BF49_0988	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	0.960
rplT	rpsN	BF49_0134	BF49_6243	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S14p S29e SSU ribosomal protein S14p S29e zincindependent; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.959
rplT	rpsR	BF49_0134	BF49_0989	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S18p SSU ribosomal protein S18p zincindependent; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.973
rplT	rpsU	BF49_0134	BF49_4413	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.	0.944
rpmB	rplT	BF49_0617	BF49_0134	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.957
rpmB	rpmE	BF49_0617	BF49_4283	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L31p LSU ribosomal protein L31p zincindependent; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.964
rpmB	rpmF	BF49_0617	BF49_7238	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.967
rpmB	rpmG	BF49_0617	BF49_6460	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L33p LSU ribosomal protein L33p zincindependent; Belongs to the bacterial ribosomal protein bL33 family.	0.981
rpmB	rpmI	BF49_0617	BF49_0133	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L35p; Belongs to the bacterial ribosomal protein bL35 family.	0.969
rpmB	rpsB	BF49_0617	BF49_6701	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S2p SAe; Belongs to the universal ribosomal protein uS2 family.	0.966
rpmB	rpsF	BF49_0617	BF49_0988	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.	0.965
rpmB	rpsN	BF49_0617	BF49_6243	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S14p S29e SSU ribosomal protein S14p S29e zincindependent; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.972
rpmB	rpsR	BF49_0617	BF49_0989	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S18p SSU ribosomal protein S18p zincindependent; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.965
rpmB	rpsU	BF49_0617	BF49_4413	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.	0.961