STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0137DNA methylase putative. (148 aa)    
Predicted Functional Partners:
pheT
PhenylalanyltRNA synthetase beta chain EC 61120; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.798
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
  
    0.719
BF49_0139
FIG00439641 hypothetical protein.
       0.697
pheS
PhenylalanyltRNA synthetase alpha chain EC 61120; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.453
BF49_5065
Excinuclease ABC C subunitlike.
  
     0.450
BF49_6178
Excinuclease ABC C subunitlike.
  
     0.415
BF49_6183
Excinuclease ABC C subunitlike.
  
     0.415
BF49_6027
Excinuclease ABC C subunitlike.
  
     0.413
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.