STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0146HydroxymethylglutarylCoA lyase EC 4134; Belongs to the alpha-IPM synthase/homocitrate synthase family. (315 aa)    
Predicted Functional Partners:
BF49_3527
MethylglutaconylCoA hydratase EC 42118.
 
 
 0.968
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
 
 0.957
BF49_6856
AcetoacetylCoA synthetase EC 62116.
 
 
 0.938
BF49_3551
3oxoadipate CoAtransferase subunit A EC 2836.
  
 
 0.930
BF49_4440
SuccinylCoA3ketoacidcoenzyme A transferase subunit A EC 2835.
  
 
 0.930
BF49_5251
3oxoadipate CoAtransferase subunit A EC 2836.
  
 
 0.930
adc
Acetoacetate decarboxylase EC 4114; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
     
  0.929
BF49_1107
Acetoacetate decarboxylase EC 4114.
     
  0.929
BF49_1909
Dbetahydroxybutyrate dehydrogenase EC 11130.
  
 
 0.927
BF49_3550
3oxoadipate CoAtransferase subunit B EC 2836.
  
 
 0.927
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.