STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0150Putative multidrug resistance efflux pump protein. (378 aa)    
Predicted Functional Partners:
BF49_0149
Multidrug resistance protein B.
 
 0.974
BF49_3119
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
 0.892
BF49_5034
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
 0.890
BF49_7058
RND efflux system outer membrane lipoprotein NodT family.
 
 0.883
BF49_2125
Inner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily.
 
 0.880
BF49_7038
Type I secretion outer membrane protein TolC precursor.
 
 0.875
BF49_1658
Type I secretion outer membrane protein TolC precursor.
 
 0.870
BF49_7255
Drug resistance transporter EmrBQacA subfamily; Belongs to the major facilitator superfamily.
 
 0.865
BF49_4578
Heavy metal RND efflux outer membrane protein CzcC family.
  
 0.836
BF49_6626
Heavy metal RND efflux outer membrane protein CzcC family.
  
 0.836
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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