STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0153FIG00440777 hypothetical protein. (177 aa)    
Predicted Functional Partners:
BF49_4013
Conserved hypothetical protein in cyt c oxidase gene clusters.
  
     0.732
BF49_6464
ZINCFINGER PROTEIN.
  
     0.707
BF49_0154
ADA regulatory protein MethylatedDNAproteincysteine methyltransferase EC 21163.
       0.676
BF49_5040
ZINCFINGER PROTEIN.
  
     0.676
BF49_7281
Sensor histidine kinase PrrB RegB EC 273.
  
     0.671
BF49_6656
FIG00439560 hypothetical protein.
  
     0.641
nth
Endonuclease III EC 429918; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.624
BF49_7282
Dna binding response regulator PrrA RegA.
  
     0.508
BF49_2085
vWFAlike protein with metal ion dependent adhesion motif MIDAS.
  
     0.471
BF49_3472
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
  
     0.452
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.