STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0159NADPHquinone oxidoreductase. (192 aa)    
Predicted Functional Partners:
pyrF
Orotidine 5phosphate decarboxylase EC 41123; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.852
BF49_0157
FIG01306808 hypothetical protein.
       0.768
BF49_0160
Phospholipid Nmethyltransferase.
       0.683
BF49_1444
Cobalamin biosynthesis protein BluB 56dimethylbenzimidazole synthase flavin destructase family.
 
  
 0.671
BF49_3019
Riboflavin kinase EC 27126 FMN adenylyltransferase EC 2772; Belongs to the ribF family.
    
 0.645
BF49_3112
Nitrilotriacetate monooxygenase component A.
  
 0.589
BF49_3127
Long-chain alkane monooxygenase; Coenzyme F420dependent N5N10methylene tetrahydromethanopterin reductase and related flavindependent oxidoreductases.
  
 0.589
BF49_6462
Nitrilotriacetate monooxygenase component A.
  
 0.589
BF49_0793
Superfamily I DNA and RNA helicases and helicase subunits.
  
    0.570
BF49_1035
Glutathione Stransferase EC 25118; Belongs to the GST superfamily.
  
  
 0.547
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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