STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0179Flp pilus assembly protein TadD contains TPR repeat. (261 aa)    
Predicted Functional Partners:
BF49_4214
Type IV prepilin peptidase TadVCpaA.
 
   
 0.806
BF49_4210
Type IIIV secretion system ATPase TadZCpaE associated with Flp pilus assembly.
 
  
 0.803
BF49_0178
Type IIIV secretion system ATPase TadZCpaE associated with Flp pilus assembly.
 
  
 0.800
BF49_4218
Similar to secretin RcpACpaC associated with Flp pilus assembly.
 
 
 0.799
BF49_4212
Type IIIV secretion system secretin RcpACpaC associated with Flp pilus assembly; Belongs to the bacterial secretin family.
 
 
 0.780
BF49_0176
Type IIIV secretion system secretin RcpACpaC associated with Flp pilus assembly; Belongs to the bacterial secretin family.
 
 
 0.777
BF49_0175
Flp pilus assembly protein RcpCCpaB.
 
  
 0.775
BF49_0177
Flp pilus assembly protein CpaD.
 
   
 0.773
BF49_4207
Type IIIV secretion system protein TadC associated with Flp pilus assembly.
 
  
 0.773
BF49_4211
Flp pilus assembly protein CpaD.
 
   
 0.773
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.