STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0181MG2 CHELATASE FAMILY PROTEIN ComMrelated protein. (512 aa)    
Predicted Functional Partners:
BF49_0571
Competence protein F homolog phosphoribosyltransferase domain protein YhgH required for utilization of DNA as sole source of carbon and energy.
 
  
 0.852
BF49_6474
Rossmann fold nucleotidebinding protein Smf possibly involved in DNA uptake.
 
 
 0.832
BF49_6727
DNA internalizationrelated competence protein ComECRec2.
 
  
 0.745
ruvC
Crossover junction endodeoxyribonuclease RuvC EC 31224; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
 
   
 0.733
BF49_0173
Endonuclease EC 31; Belongs to the UPF0102 family.
 
  
 0.691
BF49_0182
FIG00442129 hypothetical protein.
       0.583
BF49_2158
Probable RuBisCoexpression protein CbbX.
    
  0.544
BF49_5293
Glycosyl transferase group 1.
   
    0.529
BF49_4785
Flagellar basalbody rod protein FlgF; Belongs to the flagella basal body rod proteins family.
   
   0.501
BF49_5816
Flagellar basalbody rod protein FlgF; Belongs to the flagella basal body rod proteins family.
   
   0.501
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.