Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_0196PROBABLE INTRACELLULAR SEPTATION PROTEIN. (205 aa)    
Predicted Functional Partners:
BF49_0195
Aminoglycoside 6Nacetyltransferase.
       0.799
hslU
ATPdependent hsl protease ATPbinding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
       0.686
hslV
ATPdependent protease HslV EC 3425; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
       0.648
BF49_2343
FIG01006956 hypothetical protein.
  
     0.552
BF49_0198
Putative membrane protein of unknown function.
       0.544
BF49_5860
FIG00442729 hypothetical protein.
  
     0.502
BF49_6042
FIG00444123 hypothetical protein.
  
     0.484
BF49_6497
Bsl5083 protein.
  
     0.453
BF49_1620
FIG00440661 hypothetical protein.
  
     0.438
BF49_0192
FIG00439805 hypothetical protein.
 
     0.436
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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