Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_0228cAMPbinding proteins catabolite gene activator and regulatory subunit of cAMPdependent protein kinases. (124 aa)    
Predicted Functional Partners:
BF49_4472
FIG065752 hypothetical protein.
  
     0.764
BF49_5187
Bll6480 protein.
 
     0.757
BF49_6084
FIG01004998 hypothetical protein.
  
     0.742
BF49_3051
FIG00444079 hypothetical protein.
  
     0.723
BF49_4395
Predicted integral membrane protein.
  
     0.722
BF49_6539
FIG00441513 hypothetical protein.
  
     0.700
BF49_5754
Kinesinlike protein.
  
 
  0.698
BF49_0227
DNAbinding response regulator.
  
 
 0.693
BF49_0083
N-acetylmuramate 1-kinase; TsaE protein required for threonylcarbamoyladenosine t6A37 formation in tRNA Phosphotransferase involved in threonylcarbamoyladenosine t6A37 formation in tRNA.
  
     0.691
BF49_0378
FIG00441882 hypothetical protein.
  
     0.690
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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