STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0230Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (270 aa)    
Predicted Functional Partners:
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.774
BF49_0086
FIG041266 ATPdependent nuclease subunit B.
 
     0.772
BF49_0231
Cell division protein FtsK.
 
  
 0.752
BF49_3350
Bll1313 protein.
  
     0.708
BF49_0596
FIG003437 hypothetical with DnaJlike domain.
 
   
 0.702
BF49_6689
Lipoprotein releasing system transmembrane protein LolC.
 
 
 
 0.699
BF49_0087
FIG061771 ATPdependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily.
 
     0.697
BF49_6669
Lipoprotein releasing system transmembrane protein LolC.
 
 
 
 0.692
BF49_0218
DNA polymerase III delta subunit EC 2777.
 
   
 0.678
BF49_0961
DNA polymerase III chi subunit EC 2777.
  
     0.663
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.