STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0234Ammonium transporter. (482 aa)    
Predicted Functional Partners:
BF49_6609
Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 
 0.988
BF49_0235
Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 
 0.987
BF49_0240
Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 
 
 0.957
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
 
  
 0.822
BF49_7023
Nitrogen regulation protein NtrB EC 27133.
  
 
 0.786
BF49_0391
Aconitate hydratase EC 4213; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.646
BF49_3335
Aspartate ammonialyase EC 4311.
   
  
 0.610
BF49_6920
Response regulator NasT.
  
  
 0.544
BF49_7071
Sodiumdependent phosphate transporter.
     
 0.526
BF49_6608
Glutamine synthetase type I EC 6312.
  
  
 0.514
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.