Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_02552hydroxychromene2carboxylate isomerase family protein glutathionedependent. (202 aa)    
Predicted Functional Partners:
BF49_0010
Hypothetical protein.
  
     0.672
BF49_7335
Bll0819 protein.
  
     0.672
BF49_4746
Shortchain dehydrogenase associated with 2hydroxychromene2carboxylate isomerase family protein.
 
     0.586
BF49_0256
Multi antimicrobial extrusion protein Nadrug antiporter MATE family of MDR efflux pumps.
       0.537
BF49_1756
COGs COG0183.
  
     0.476
BF49_0257
FIG00439765 hypothetical protein.
 
     0.470
BF49_0254
2dehydropantoate 2reductase EC 111169; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.469
BF49_1848
FIG00442018 hypothetical protein.
  
  
  0.467
BF49_0636
Bll0142 protein.
  
  
  0.420
BF49_7227
HADsuperfamily hydrolase subfamily IA variant 3.
  
     0.415
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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