STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0265InterPro IPR006021 COGs COG1525. (195 aa)    
Predicted Functional Partners:
BF49_0264
Hypothetical protein.
       0.645
rnpA
Ribonuclease P protein component EC 31265; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.636
BF49_6786
Sporulation related domain.
 
     0.580
BF49_5825
FIG00852664 hypothetical protein.
  
     0.566
BF49_3063
FIG00441725 hypothetical protein.
  
     0.540
BF49_2946
FIG00853207 hypothetical protein.
  
     0.520
BF49_3904
Blr0101 hypothetical protein.
  
     0.517
BF49_7074
Phosphatidylglycerophosphatase B EC 31327.
  
    0.517
BF49_0275
FIG006581 hypothetical protein.
  
     0.516
BF49_5969
Bll5679 protein.
  
 
 0.500
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.