STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0271FIG006231 RNAbinding protein. (137 aa)    
Predicted Functional Partners:
tsaD
TsaDKae1Qri7 protein required for threonylcarbamoyladenosine t6A37 formation in tRNA; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
     
 0.827
gpsA
Glycerol3phosphate dehydrogenase NADP EC 11194; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.801
BF49_0274
UroporphyrinogenIII synthase EC 42175; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
       0.574
BF49_5419
Heat shock protein; Belongs to the small heat shock protein (HSP20) family.
   
    0.569
BF49_1922
Cytochrome c oxidase subunit CcoP EC 1931; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.539
BF49_1924
Cytochrome c oxidase subunit CcoO EC 1931.
   
 
  0.530
BF49_5272
Cytochrome c oxidase polypeptide III EC 1931.
    
 0.525
BF49_5273
Cytochrome c oxidase polypeptide I EC 1931; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
 0.525
BF49_1923
Cytochrome c oxidase subunit CcoQ EC 1931.
   
 
  0.519
BF49_5266
Cytochrome c oxidase polypeptide III EC 1931.
   
 
 0.513
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.