STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0304Bll0546 hypothetical protein. (296 aa)    
Predicted Functional Partners:
BF49_3042
Mlr4903 protein.
 
     0.740
BF49_4392
Hypothetical protein.
 
    0.699
BF49_5180
FIG00439865 hypothetical protein.
  
     0.698
BF49_0305
FIG00442991 hypothetical protein.
       0.686
BF49_2692
FIG00440014 hypothetical protein.
 
     0.683
BF49_3570
Hypothetical protein.
  
     0.661
BF49_4070
FIG00443189 hypothetical protein.
  
  
  0.656
BF49_1176
Transcriptional regulatory protein.
  
     0.655
BF49_1177
Transcriptional regulatory protein.
  
     0.645
BF49_0303
Histone acetyltransferase HPA2 and related acetyltransferases.
       0.614
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.