STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0311FIG000557 hypothetical protein cooccurring with RecR. (254 aa)    
Predicted Functional Partners:
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
    
 0.673
BF49_1165
Adenylate cyclase EC 4611.
   
 0.662
BF49_3165
Adenylate cyclase EC 4611.
   
 0.662
BF49_0312
Twocomponent response regulator.
   
   0.589
BF49_0310
Prolipoprotein diacylglyceryl transferase EC 2499; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
       0.561
BF49_0308
Hypothetical protein.
       0.556
BF49_0309
Molybdenum cofactor biosynthesis protein MoaA.
       0.556
BF49_2142
Twocomponent hybrid sensor and regulator.
  
 
 0.515
BF49_0782
Endonuclease.
    
 0.443
rpoB
DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.434
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.