STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0314FIG00444255 hypothetical protein. (469 aa)    
Predicted Functional Partners:
BF49_3360
TRAP transporter 4TM12TM fusion protein unknown substrate 1.
 
 
  0.833
BF49_1123
TRAP transporter 4TM12TM fusion protein unknown substrate 2.
 
 
  0.813
BF49_3359
DUF1850 domaincontaining protein.
 
 
  0.706
BF49_3361
TRAP transporter solute receptor unknown substrate 1.
  
     0.687
BF49_2639
TRAP transporter solute receptor TAXI family precursor.
  
     0.686
BF49_5969
Bll5679 protein.
  
     0.654
BF49_2972
FIG00439885 hypothetical protein.
  
     0.638
BF49_6068
FIG00442381 hypothetical protein.
  
     0.622
BF49_5928
FIG00439832 hypothetical protein.
  
     0.597
BF49_5947
Possible cyclic nucleotidebinding domain.
  
     0.593
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.