STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0319FIG00740902 hypothetical protein. (215 aa)    
Predicted Functional Partners:
BF49_0632
FIG00439869 hypothetical protein.
  
     0.669
BF49_0276
FIG000868 Homolog of E coli HemY protein.
  
     0.667
BF49_0086
FIG041266 ATPdependent nuclease subunit B.
  
     0.635
BF49_0760
FIG167255 hypothetical protein.
  
     0.624
BF49_0201
Transporter.
  
     0.596
BF49_0068
FIG01004913 hypothetical protein.
 
     0.584
BF49_0733
Large exoproteins involved in heme utilization or adhesion.
  
    0.581
BF49_4381
TolA protein.
  
     0.579
BF49_0121
FIG00793979 hypothetical protein.
  
     0.571
BF49_0082
FIG056333 sensor.
  
     0.562
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.