Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0322Bll0523 protein. (258 aa)    
Predicted Functional Partners:
BF49_7074
Phosphatidylglycerophosphatase B EC 31327.
 
   
 0.634
BF49_0321
FIG00444358 hypothetical protein.
       0.619
argG
Argininosuccinate synthase EC 6345; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
       0.583
BF49_6431
FIG00440573 hypothetical protein.
  
    0.532
BF49_6432
Bll5137 protein.
  
     0.524
rlmN
Ribosomal RNA large subunit methyltransferase N EC 211; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.
       0.518
BF49_6006
Dolicholphosphate mannosyltransferase EC 24183 homolog.
 
  
 0.514
BF49_1620
FIG00440661 hypothetical protein.
  
     0.505
BF49_7075
4amino4deoxyLarabinose transferase and related glycosyltransferases of PMT family.
 
   
 0.492
BF49_0733
Large exoproteins involved in heme utilization or adhesion.
  
     0.476
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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