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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0332Pyridoxamine 5phosphate oxidase EC 1435. (165 aa)    
Predicted Functional Partners:
BF49_6815
Acetyltransferaselike.
  
  
 0.809
BF49_4273
Conserved hypothetical protein hypothetical UPF0337 protein; Belongs to the UPF0337 (CsbD) family.
  
    0.788
BF49_2393
FIG00441768 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.785
BF49_3886
UPF0337 protein blr1496; Belongs to the UPF0337 (CsbD) family.
  
    0.785
BF49_1884
Flavin reductase EC 15130.
  
    0.678
BF49_5808
Rrf2linked NADHflavin reductase.
  
    0.678
BF49_1373
Gluconolactonase EC 31117 Isochorismatase EC 3321.
   
    0.664
BF49_0333
Lactoylglutathione lyase and related lyases.
       0.576
rplY
LSU ribosomal protein L25p; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
   
    0.566
BF49_0334
FIG00441277 hypothetical protein.
       0.529
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.