Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0342AcetoacetylCoA synthetase leucine EC 62116. (509 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 0.937
BF49_1272
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
  
 0.920
BF49_1867
Aldehyde dehydrogenase EC 1213.
  
 0.920
BF49_3132
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
  
 0.920
BF49_1634
MethylmalonylCoA mutase EC 54992.
    
 0.904
BF49_1637
MethylmalonylCoA mutase EC 54992.
    
 0.904
BF49_6655
MethylmalonylCoA epimerase EC 51991 EthylmalonylCoA epimerase.
     
  0.900
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.860
BF49_1772
Betaureidopropionase EC 3516.
   
 
  0.800
BF49_5328
Acetylornithine deacetylaseSuccinyldiaminopimelate desuccinylase and related deacylases.
   
 
  0.800
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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