STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0356Transcriptional regulator AraC family. (323 aa)    
Predicted Functional Partners:
BF49_2727
Transcriptional regulatory protein.
 
 
 0.585
BF49_0357
Hypothetical protein.
       0.572
BF49_6307
Transcriptional regulator AraC family.
 
 
 0.566
BF49_5358
Putative Transcriptional regulatory protein AraCXylS family.
 
 
 0.537
BF49_5364
Putative Transcriptional regulatory protein AraCXylS family.
 
 
 0.537
BF49_5369
Putative Transcriptional regulatory protein AraCXylS family.
 
 
 0.529
BF49_5314
Transcriptional regulator AraC family.
 
 
 0.516
BF49_4721
Transcriptional regulator AraC family.
 
 
 0.505
BF49_1058
Uncharacterized protein ygiV.
 
 
 0.494
BF49_1179
Transcriptional regulator AraC family.
 
 
 0.484
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.