STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0378FIG00441882 hypothetical protein. (156 aa)    
Predicted Functional Partners:
BF49_0377
Protein of unknown function DUF541.
       0.853
BF49_2299
FIG00887518 hypothetical protein.
  
     0.760
BF49_5187
Bll6480 protein.
  
     0.757
BF49_2981
FIG00441988 hypothetical protein.
  
     0.747
BF49_0990
FIG003573 hypothetical protein.
  
     0.730
BF49_4010
CoxF protein.
  
     0.725
BF49_6312
FIG00446684 hypothetical protein.
  
     0.724
rpoB
DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.721
BF49_6117
Bll5524 protein.
  
     0.718
BF49_2099
FIG00440914 hypothetical protein.
  
     0.704
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.