Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_0385Probable intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (200 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle receptor protein FtsY alpha subunit TC 3A511; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
       0.853
BF49_0654
FIG00441286 hypothetical protein.
  
    0.701
BF49_0383
Putative RNA pseudouridine synthase Uracil hydrolyase.
       0.693
BF49_4506
FIG00480737 hypothetical protein.
  
     0.536
BF49_3480
Pyridoxal5phosphate phosphatase EC 31374 Alphaproteobacterial type.
 
     0.479
BF49_0393
FIG00450577 hypothetical protein.
 
     0.474
BF49_0319
FIG00740902 hypothetical protein.
 
     0.425
BF49_0326
FIG00740902 hypothetical protein.
 
     0.425
msrB
Peptide methionine sulfoxide reductase MsrB EC 18412.
  
    0.404
BF49_5779
Peptide methionine sulfoxide reductase MsrB EC 18412.
  
    0.404
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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