STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
BF49_0386Cytochrome ctype biogenesis protein CcmGDsbE thioldisulfide oxidoreductase. (194 aa)    
Predicted Functional Partners:
ccmC
Cytochrome ctype biogenesis protein CcmC putative heme lyase for CcmE; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
  
 0.986
BF49_1559
Cytochrome c heme lyase subunit CcmF.
 
  
 0.973
BF49_0389
ABC transporter involved in cytochrome c biogenesis CcmB subunit; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
  
 0.952
BF49_1558
Cytochrome c heme lyase subunit CcmL; Possible subunit of a heme lyase.
 
  
 0.929
ccmE
Cytochrome ctype biogenesis protein CcmE heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
  
 0.925
BF49_1561
Cytochrome c heme lyase subunit CcmH.
 
  
 0.895
BF49_6318
Alkyl hydroperoxide reductase subunit Clike protein.
  
 0.863
BF49_0387
Cytochrome ctype biogenesis protein CcmD interacts with CcmCE; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
     
 0.857
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.817
BF49_1531
Putative heat shock protein YegD.
  
 0.809
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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