STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0396FIG005935 membrane protein; Belongs to the BI1 family. (263 aa)    
Predicted Functional Partners:
BF49_0201
Transporter.
  
  
 0.649
BF49_0398
ABC transporter ATPbinding protein YvcR.
  
    0.626
BF49_0397
FIG00809136 hypothetical protein.
       0.623
htpX
Heat shock protein HtpX EC 3424; Belongs to the peptidase M48B family.
  
  
 0.583
htpX-2
Peptidase M48 Ste24p; Belongs to the peptidase M48B family.
  
  
 0.583
BF49_5833
Bll5807 protein.
   
  
 0.525
BF49_3350
Bll1313 protein.
  
     0.524
yidC
Inner membrane protein translocase component YidC long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
     0.509
mscL
Largeconductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
  
  
 0.473
msrB
Peptide methionine sulfoxide reductase MsrB EC 18412.
  
   0.466
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.