STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0397FIG00809136 hypothetical protein. (856 aa)    
Predicted Functional Partners:
BF49_0398
ABC transporter ATPbinding protein YvcR.
 
  
  0.949
BF49_0399
Arylesterase precursor EC 3112.
 
     0.908
BF49_7187
AttH component of AttEFGH ABC transport system.
  
  
 0.752
BF49_6439
ATPGTPbinding site motif A.
  
     0.540
BF49_0148
Bll0692 protein.
  
     0.515
lolD
Lipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.507
lolD-2
Lipoprotein releasing system ATPbinding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.507
BF49_7185
AttE component of AttEFGH ABC transport system.
  
 
 0.507
BF49_0396
FIG005935 membrane protein; Belongs to the BI1 family.
       0.486
BF49_4604
ABCtype antimicrobial peptide transport system ATPase component.
  
 
 0.446
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.