Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0411FIG00444009 hypothetical protein. (176 aa)    
Predicted Functional Partners:
BF49_0410
Dihydrolipoamide dehydrogenase of 2oxoglutarate dehydrogenase EC 1814.
       0.779
BF49_0733
Large exoproteins involved in heme utilization or adhesion.
  
     0.666
BF49_6068
FIG00442381 hypothetical protein.
  
     0.644
BF49_0412
FIG00441012 hypothetical protein.
  
     0.634
BF49_2748
Chromosome segregation ATPases.
  
     0.611
BF49_0693
FIG00442920 hypothetical protein.
 
     0.605
BF49_2099
FIG00440914 hypothetical protein.
  
     0.592
BF49_1563
FIG00442554 hypothetical protein.
  
     0.591
BF49_4439
AsmA family protein.
  
     0.587
BF49_2299
FIG00887518 hypothetical protein.
  
     0.581
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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