STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0412FIG00441012 hypothetical protein. (196 aa)    
Predicted Functional Partners:
BF49_6064
FIG00439945 hypothetical protein.
  
     0.759
BF49_5005
FIG00442082 hypothetical protein.
  
     0.744
BF49_5969
Bll5679 protein.
  
     0.744
BF49_6068
FIG00442381 hypothetical protein.
  
     0.736
BF49_4002
FIG00853591 hypothetical protein.
  
     0.731
BF49_1638
Bll3052 protein.
  
     0.718
BF49_2748
Chromosome segregation ATPases.
  
     0.712
xerC
Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.696
BF49_1563
FIG00442554 hypothetical protein.
  
     0.665
BF49_6117
Bll5524 protein.
  
     0.652
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.