Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_0424Carboxylterminal protease EC 3421102; Belongs to the peptidase S41A family. (451 aa)    
Predicted Functional Partners:
BF49_0425
Periplasmic septal ring factor with murein hydrolase activity EnvCYibP.
 
  
 0.931
BF49_5306
TPR repeat.
  
 
 0.729
BF49_2351
Hypothetical protein.
    
 
 0.715
BF49_4202
NLPP60 family lipoprotein.
    
 
 0.682
BF49_2504
Hypothetical protein.
  
 0.674
BF49_3572
FIG01200701 possible membrane protein.
  
 0.674
BF49_4411
FIG00853353 hypothetical protein.
  
 0.674
BF49_4812
Chemotaxis protein motC.
  
 0.674
BF49_6683
Glycosyl hydrolase BNR repeat.
  
 0.674
BF49_6708
Intramembrane protease RasPYluC implicated in cell division based on FtsL cleavage.
 
  
 0.607
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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