STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_0424Carboxylterminal protease EC 3421102; Belongs to the peptidase S41A family. (451 aa)    
Predicted Functional Partners:
BF49_0425
Periplasmic septal ring factor with murein hydrolase activity EnvCYibP.
 
  
 0.929
BF49_2504
Hypothetical protein.
  
  0.698
BF49_3572
FIG01200701 possible membrane protein.
  
  0.698
BF49_4411
FIG00853353 hypothetical protein.
  
  0.698
BF49_4812
Chemotaxis protein motC.
  
  0.698
BF49_6683
Glycosyl hydrolase BNR repeat.
  
  0.698
BF49_2351
Hypothetical protein.
    
 
 0.690
BF49_6708
Intramembrane protease RasPYluC implicated in cell division based on FtsL cleavage.
 
  
 0.604
rlmH
LSU m3Psi1915 methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.558
BF49_0423
Putative periplasmic protein YibQ distant homology with nucleoside diphosphatase and polysaccharide deacetylase.
       0.539
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.