Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_043650S ribosomal protein acetyltransferase. (197 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III EC 31263; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.592
BF49_0437
Hypothetical protein.
       0.572
BF49_5665
Nacetylneuraminate synthase EC 25156.
  
 
 0.535
BF49_5664
NAcetylneuraminate cytidylyltransferase EC 27743.
    
 0.515
BF49_5656
Perosamine synthetase; BacillosamineLegionaminic acid biosynthesis aminotransferase PglE 4keto6deoxyNAcetylDhexosaminylLipid carrier aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.495
BF49_5730
DegTDnrJEryC1StrS family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.495
BF49_6200
UDP4amino4deoxyLarabinoseoxoglutarate aminotransferase EC 261; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.495
BF49_6201
UDP4amino4deoxyLarabinoseoxoglutarate aminotransferase EC 261; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.495
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
   
 
 0.482
BF49_0917
NADdependent malic enzyme EC 11138.
    
 0.478
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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